Backport of MAGETWO-59256 for 2.1: Custom composer modules break Component Manager #6718 #9692
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Description
Backport of issue MAGETWO-59256 for 2.1
Cherry picked commits from develop, rebased, and squashed. Then removed some code from farther up the branch to make compatible with 2.1
First time making a PR for this so if I need to make changes/fix let me know.
Commits from the develop branch:
Fixed Issues (if relevant)
Manual testing scenarios