uPolar R Visualization Tool

Microfluidics Images :

uPolar Visulization examples :

uPolar Visualization for TrapNo. 10 :

No. 1 to 8 represent individual event on the plots

uPolar Visualization with RLS for Trap No. 1 :

Red-Stars represent division point

uPolar Visualization for migrating mouse fibroblasts

37 time-lapse mouse cells microscopic images with color tag cell tracking inlcuding cells size:

Installation :

install.packages("devtools")

devtools::install.packages(c("dplyr,plotly,plyr"))

devtools::install_github("merang/uPolar/uPolar")

How to run :

library(dplyr)

library(plotly)

library(plyr)

Load data

df= read.csv("../data/BC8_tp10_TpTmXYAreaRLS.csv")

uPolar function

uPolar(df,refPoint=NULL,title=NULL,refLine=NULL,Area=FALSE,aAdjust=1,zeroAdjust= NULL,track = FALSE,RLS= FALSE)

Poster :

https://f1000research.com/author/poster/thankyou/1118884