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clean up mast setup script #305

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Merged
merged 1 commit into from
Oct 3, 2025
Merged

clean up mast setup script #305

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2 changes: 2 additions & 0 deletions apps/mast/README.md
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Expand Up @@ -4,6 +4,8 @@ A simple setup script to automatically configure your environment for running Fo

## Quick Start

⚠️ Important Note: the setup script will clone the forge repository under "/data/users/$USER".

### 1. Run the Setup Script

The `env_setup.sh` script will automatically:
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32 changes: 0 additions & 32 deletions apps/mast/env_setup.sh
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Expand Up @@ -96,38 +96,6 @@ mount_workspace() {
return 0
}

# Function to safely deactivate conda
safe_conda_deactivate() {
if command -v conda >/dev/null 2>&1; then
if conda info --envs >/dev/null 2>&1; then
conda deactivate 2>/dev/null || log_warn "Could not deactivate conda (might not be in an environment)"
else
log_warn "Conda not properly initialized, skipping deactivate"
fi
else
log_warn "Conda command not found, skipping deactivate"
fi
}

# Function to safely activate conda environment
safe_conda_activate() {
local env_name="$1"

if command -v conda >/dev/null 2>&1; then
if conda info --envs >/dev/null 2>&1; then
conda activate "$env_name"
else
log_warn "Conda not properly initialized"
log_info "Attempting to use xl_conda.sh activation instead..."
source "$CONDA_SCRIPT_PATH" activate "$env_name"
fi
else
log_warn "Conda command not found"
log_info "Attempting to use xl_conda.sh activation instead..."
source "$CONDA_SCRIPT_PATH" activate "$env_name"
fi
}

# Check if required environment variables are set
if [ -z "$USER" ]; then
log_error "USER environment variable is not set"
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