feat: streamline and clean up codebase

[adelrodriguez]

Greptile Summary

This PR removes two wrapper packages (@init/ai and @init/security) that were primarily re-exporting external dependencies with minimal added value, and refactors @init/analytics web module to use a proper singleton pattern.

Key Changes:

• Deleted @init/ai package - 90% re-exports of AI SDK, OpenAI provider, and Upstash vector utilities; users can now import directly from ai, @ai-sdk/react, and @upstash/vector
• Deleted @init/security package - Arcjet re-exports removed; apps now use @arcjet/ip directly for IP detection in rate limiting
• Removed security middleware - The global security wrapper in apps/api/src/index.ts and context injection in routes have been removed
• Refactored analytics web module - Changed from pure re-export (export * from "@plausible-analytics/tracker") to a singleton factory pattern with explicit initialization
• Updated template utilities - Removed ai and security from workspace package lists and app dependency configurations

The changes successfully reduce indirection and maintenance burden while preserving all functionality. The migration is clean with no remaining references to deleted packages (verified via grep). The lockfile reflects the removal of transitive dependencies.

Confidence Score: 5/5

• This PR is safe to merge with no identified risks
• The refactoring is well-executed with comprehensive documentation, clean deletion of wrapper packages, proper migration to direct dependencies, and no remaining import references to deleted packages. The analytics refactor follows the singleton pattern consistently used in the codebase. All changes align with the documented streamlining plan.
• No files require special attention

Important Files Changed

Filename	Overview
apps/api/src/index.ts	Removed security middleware wrapper from fetch handler, now using app.fetch directly
apps/api/src/shared/middleware.ts	Replaced @init/security/tools import with direct @arcjet/ip import for IP detection
apps/api/src/routes/index.ts	Removed security context from middleware and deleted security import
apps/api/package.json	Added @arcjet/ip dependency to replace removed @init/security package
packages/analytics/src/web.ts	Refactored from pure re-export to singleton factory pattern with proper initialization
scripts/template/utils.ts	Removed ai and security packages from workspace definitions and app dependencies

Sequence Diagram

sequenceDiagram
    participant Dev as Developer
    participant API as API Server
    participant Middleware as Middleware Layer
    participant Arcjet as @arcjet/ip
    participant Analytics as Web Analytics
    participant Plausible as Plausible Tracker
    
    Note over Dev,Plausible: Before: Security & AI packages wrapped dependencies
    Dev->>API: HTTP Request
    API->>Middleware: Security wrapper intercepts
    Note over Middleware: Used @init/security
    Middleware->>Arcjet: Get IP via wrapper
    Arcjet-->>Middleware: IP address
    
    Note over Dev,Plausible: After: Direct dependency usage
    Dev->>API: HTTP Request
    API->>Middleware: Direct middleware processing
    Note over Middleware: Uses @arcjet/ip directly
    Middleware->>Arcjet: Get IP (no wrapper)
    Arcjet-->>Middleware: IP address
    
    Note over Analytics,Plausible: Analytics refactored to singleton pattern
    Dev->>Analytics: createWebAnalytics(domain)
    Analytics->>Analytics: singleton("analytics-web")
    Analytics->>Plausible: init({domain})
    Plausible-->>Analytics: Initialized
    Analytics-->>Dev: {track}

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[adelrodriguez]

• refactor: expand uses of effect and remove unused utils #66
• feat: expand init-now cli and use Effect for scripting #65
• feat: streamline and clean up codebase #63 👈 (View in Graphite)
• feat: migrate to adamantite@0.23.0 #62
• main

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