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Ryan Mulqueen edited this page Jun 19, 2026 · 59 revisions

Welcome to the 2026 CSHL Single Cell and Spatial Omics Data Analysis Workshops!

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Here are the list of workshops we will be covering:

Workshop Instructors
1 scDNA Analysis: CopyKit Nico Boudoin
2 scRNA: Processing Basics Chenling Tang
3 scRNA: Copy Number Inference Rui Ye
4 Spatial RNA: VisiumHD Aatish Thennavan
5 scRNA: Integration Ryan Mulqueen
6 Spatial RNA: Xenium Ping Xu
Lecture Instructors
Single Cell Genomics Overview Nick Navin
Introduction to Spatial Transcriptomics Aatish Thennavan
scDNA data analysis using CopyKit Kris Wang

Thanks from the Navin lab team and hopefully it goes smoothly!!

Our instructors:

Nick Aatish Ryan Nico Ping Rui Mitchell Chenling Jerome
Nick Aatish Ryan Nico Ping Rui

Our Teaching Assistant:

Xiang Cole Minsoo
Xiang Cole Minsoo

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