Skip to content
Effort to solve the position of acoels in the animal tree of life.
Branch: master
Clone or download
Fetching latest commit…
Cannot retrieve the latest commit at this time.
Type Name Latest commit message Commit time
Failed to load latest commit information.

Phylogenomics of Acoelomorpha

Objective: solve the phylogenetic position of acoels and nemertodermatids. Read more.


  • Developed a script/module to search and filter SRA records.
  • Searched and got a list of SRA packages.
  • Tested workflow with a few organisms.
  • Defined curation criteria: if unique, yes; if multiple, pick mixed tissues; if tissue specific, merge multiple until 40M reads.
  • Running assemblies.


  • Continue building assemblies.
  • Solve issues like quality offset, no rRNA, too large samples, multiple samples.
  • Define list of additional RNAseq assemblies.
  • Define list of additional genomic assemblies.
  • Study phylogenetics.
You can’t perform that action at this time.