Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

fix no_intervals for HaplotypeCaller #189

Merged
merged 8 commits into from
Apr 17, 2020
Merged

Conversation

maxulysse
Copy link
Member

nf-core/sarek pull request

While trying to reproduce #187 I stumbled into an issue with HaplotypeCaller.
Here is the fix

Many thanks for contributing to nf-core/sarek!

Please fill in the appropriate checklist below (delete whatever is not relevant).
These are the most common things requested on pull requests (PRs).

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • If necessary, also make a PR on the nf-core/sarek branch on the nf-core/test-datasets repo
  • Ensure the test suite passes (nextflow run . -profile test,docker).
  • Make sure your code lints (nf-core lint .).
  • Documentation in docs is updated
  • CHANGELOG.md is updated
  • README.md is updated

Learn more about contributing: CONTRIBUTING.md

@maxulysse maxulysse added this to the 2.6 milestone Apr 17, 2020
@maxulysse maxulysse requested a review from a team April 17, 2020 12:30
@maxulysse maxulysse merged commit d553d0f into nf-core:dev Apr 17, 2020
@maxulysse maxulysse deleted the Freebayes branch April 17, 2020 13:30
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants