-
Notifications
You must be signed in to change notification settings - Fork 636
Description
Surface plot freezes when hovering on missing data when connectgaps = TRUE. It seems dependent on the size of the matrix.
Below, a reproducible example with different scenarios:
- Using the initial 15x14 matrix, the plot freezes when hovering in the bottom right corner, where the NA values are.
- With
connectgaps = FALSEno more freezing - Transposing the matrix also works
- Making the matrix a smaller also solves the issue
My original data is bigger, I searched for the smaller possible matrix where the problem occurred.
Thanks!
library(dplyr)
library(plotly)
DF_RAW = structure(c(181, 163, 60, 124, 76, 62, 73, 59, 17, 21, 26, 7, NA, NA, NA,
188, 145, 61, 130, 61, 59, 62, 57, 20, 22, 22, 6, NA, NA, NA,
137, 154, 54, 191, 75, 56, 65, 56, 22, 27, 33, 14, NA, NA, NA,
126, 185, 65, 109, 51, 71, 57, 38, 25, 23, 21, 10, NA, NA, NA,
150, 144, 44, 123, 58, 24, 48, 41, 19, 26, 21, 5, NA, NA, NA,
138, 137, 61, 130, 67, 34, 60, 44, 19, 21, 16, 4, NA, NA, NA,
121, 146, 101, 92, 70, 74, 88, 33, 18, 39, 24, 12, NA, NA, NA,
NA, 160, 129, 117, 70, 61, 42, 35, 22, 25, 21, 7, 135, 23, 8,
NA, 129, 130, 107, 64, 61, 44, 25, 23, 30, 18, 11, 140, 58, 40,
NA, 136, 131, 96, 53, 31, 51, 37, 43, 31, 19, 2, 111, 73, 41,
NA, 124, 154, 74, 62, 44, 34, 15, 26, 23, 20, 6, 113, 105, 19,
NA, 126, 251, 76, 73, 84, 47, 40, 32, 25, 32, 6, 131, 106, 13,
NA, 129, 194, 91, 53, 99, 46, 34, 60, 21, 17, 6, 148, 142, 26,
NA, 115, 119, 88, 64, 108, 37, 24, 49, 26, 17, 6, 158, 151, 47),
.Dim = 15:14,
.Dimnames = list(c("1", "2", "3", "4", "5", "6", "7", "8", "9", "10", "11", "12", "13", "14", "15"),
c("2006", "2007", "2008", "2009", "2010", "2011", "2012", "2013", "2014", "2015", "2016", "2017", "2018", "2019")))When hovering in the bottom right corner, where the big chunk of missing data is (connectgaps = TRUE), the plot freezes.
# Freezes when hovering --------------------------------------------------
DF = DF_RAW
plotly::plot_ly(x = ~ colnames(DF),
y = ~ rownames(DF),
z = ~ DF) %>%
plotly::add_surface(connectgaps = TRUE)If we use connectgaps = FALSE it does not freeze when hovering on bottom right corner
# WORKS --------------------------------------------------
DF = DF_RAW
plotly::plot_ly(x = ~ colnames(DF),
y = ~ rownames(DF),
z = ~ DF) %>%
plotly::add_surface(connectgaps = FALSE)If we transpose the DF it does not freeze when hovering on bottom left corner (where chunk of missing data is now)
# WORKS --------------------------------------------------
DF = t(DF_RAW)
plotly::plot_ly(x = ~ colnames(DF),
y = ~ rownames(DF),
z = ~ DF) %>%
plotly::add_surface(connectgaps = TRUE)If we make the matrix a tad smaller, the DF it does not freeze when hovering on bottom right corner. I tried this with different sets of data. It seems freezing occurs when the matrix is > 14x14 and connectgaps = TRUE
# WORKS --------------------------------------------------
DF = DF_RAW[1:14,]
plotly::plot_ly(x = ~ colnames(DF),
y = ~ rownames(DF),
z = ~ DF) %>%
plotly::add_surface(connectgaps = TRUE)Created on 2022-04-25 by the reprex package (v2.0.1)
Session info
sessioninfo::session_info()
#> ─ Session info ───────────────────────────────────────────────────────────────
#> setting value
#> version R version 4.1.3 (2022-03-10)
#> os Ubuntu 20.04.4 LTS
#> system x86_64, linux-gnu
#> ui X11
#> language (EN)
#> collate en_US.UTF-8
#> ctype en_US.UTF-8
#> tz Atlantic/Canary
#> date 2022-04-25
#> pandoc 2.17.1.1 @ /usr/lib/rstudio/bin/quarto/bin/ (via rmarkdown)
#>
#> ─ Packages ───────────────────────────────────────────────────────────────────
#> package * version date (UTC) lib source
#> assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.1.0)
#> callr 3.7.0 2021-04-20 [1] CRAN (R 4.1.0)
#> cli 3.2.0 2022-02-14 [1] CRAN (R 4.1.2)
#> colorspace 2.0-3 2022-02-21 [1] CRAN (R 4.1.2)
#> crayon 1.5.1 2022-03-26 [1] CRAN (R 4.1.3)
#> crosstalk 1.2.0 2021-11-04 [1] CRAN (R 4.1.2)
#> curl 4.3.2 2021-06-23 [1] CRAN (R 4.1.0)
#> data.table 1.14.2 2021-09-27 [1] CRAN (R 4.1.1)
#> DBI 1.1.2 2021-12-20 [1] CRAN (R 4.1.2)
#> digest 0.6.29 2021-12-01 [1] CRAN (R 4.1.2)
#> dplyr * 1.0.8 2022-02-08 [1] CRAN (R 4.1.2)
#> ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.1.0)
#> evaluate 0.15 2022-02-18 [1] CRAN (R 4.1.2)
#> fansi 1.0.3 2022-03-24 [1] CRAN (R 4.1.3)
#> farver 2.1.0 2021-02-28 [1] CRAN (R 4.1.0)
#> fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.1.0)
#> fs 1.5.2 2021-12-08 [1] CRAN (R 4.1.2)
#> generics 0.1.2 2022-01-31 [1] CRAN (R 4.1.2)
#> ggplot2 * 3.3.5 2021-06-25 [1] CRAN (R 4.1.0)
#> glue 1.6.2 2022-02-24 [1] CRAN (R 4.1.2)
#> gtable 0.3.0 2019-03-25 [1] CRAN (R 4.1.0)
#> highr 0.9 2021-04-16 [1] CRAN (R 4.1.0)
#> htmltools 0.5.2 2021-08-25 [1] CRAN (R 4.1.1)
#> htmlwidgets 1.5.4 2021-09-08 [1] CRAN (R 4.1.1)
#> httr 1.4.2 2020-07-20 [1] CRAN (R 4.1.0)
#> jsonlite 1.8.0 2022-02-22 [1] CRAN (R 4.1.2)
#> knitr 1.38 2022-03-25 [1] CRAN (R 4.1.3)
#> lazyeval 0.2.2 2019-03-15 [1] CRAN (R 4.1.0)
#> lifecycle 1.0.1 2021-09-24 [1] CRAN (R 4.1.1)
#> magrittr 2.0.3 2022-03-30 [1] CRAN (R 4.1.3)
#> mime 0.12 2021-09-28 [1] CRAN (R 4.1.1)
#> munsell 0.5.0 2018-06-12 [1] CRAN (R 4.1.0)
#> pillar 1.7.0 2022-02-01 [1] CRAN (R 4.1.2)
#> pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.1.0)
#> plotly * 4.10.0.9001 2022-04-25 [1] Github (plotly/plotly@01582b8)
#> processx 3.5.3 2022-03-25 [1] CRAN (R 4.1.3)
#> ps 1.7.0 2022-04-23 [1] CRAN (R 4.1.3)
#> purrr 0.3.4 2020-04-17 [1] CRAN (R 4.1.0)
#> R.cache 0.15.0 2021-04-30 [1] CRAN (R 4.1.0)
#> R.methodsS3 1.8.1 2020-08-26 [1] CRAN (R 4.1.0)
#> R.oo 1.24.0 2020-08-26 [1] CRAN (R 4.1.0)
#> R.utils 2.11.0 2021-09-26 [1] CRAN (R 4.1.1)
#> R6 2.5.1 2021-08-19 [1] CRAN (R 4.1.1)
#> reprex 2.0.1 2021-08-05 [1] CRAN (R 4.1.0)
#> rlang 1.0.2 2022-03-04 [1] CRAN (R 4.1.2)
#> rmarkdown 2.13 2022-03-10 [1] CRAN (R 4.1.2)
#> rstudioapi 0.13 2020-11-12 [1] CRAN (R 4.1.0)
#> scales 1.2.0 2022-04-13 [1] CRAN (R 4.1.3)
#> sessioninfo 1.2.2 2021-12-06 [1] CRAN (R 4.1.2)
#> stringi 1.7.6 2021-11-29 [1] CRAN (R 4.1.2)
#> stringr 1.4.0 2019-02-10 [1] CRAN (R 4.1.0)
#> styler 1.7.0 2022-03-13 [1] CRAN (R 4.1.2)
#> tibble 3.1.6 2021-11-07 [1] CRAN (R 4.1.2)
#> tidyr 1.2.0 2022-02-01 [1] CRAN (R 4.1.2)
#> tidyselect 1.1.2 2022-02-21 [1] CRAN (R 4.1.2)
#> utf8 1.2.2 2021-07-24 [1] CRAN (R 4.1.0)
#> vctrs 0.4.1 2022-04-13 [1] CRAN (R 4.1.3)
#> viridisLite 0.4.0 2021-04-13 [1] CRAN (R 4.1.0)
#> webshot 0.5.3 2022-04-14 [1] CRAN (R 4.1.3)
#> withr 2.5.0 2022-03-03 [1] CRAN (R 4.1.2)
#> xfun 0.30 2022-03-02 [1] CRAN (R 4.1.2)
#> xml2 1.3.3 2021-11-30 [1] CRAN (R 4.1.2)
#> yaml 2.3.5 2022-02-21 [1] CRAN (R 4.1.2)
#>
#> [1] /home/emrys/R/x86_64-pc-linux-gnu-library/4.1
#> [2] /usr/local/lib/R/site-library
#> [3] /usr/lib/R/site-library
#> [4] /usr/lib/R/library
#>
#> ──────────────────────────────────────────────────────────────────────────────