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TST: Fix warnings #1182

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TST: Fix warnings #1182

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18 changes: 15 additions & 3 deletions qiita_db/metadata_template/test/test_prep_template.py
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Original file line number Diff line number Diff line change
Expand Up @@ -12,6 +12,7 @@
from os import close, remove
from os.path import join, basename
from collections import Iterable
import warnings

import numpy.testing as npt
import pandas as pd
Expand Down Expand Up @@ -1307,9 +1308,20 @@ def test_check_restrictions(self):
self.assertEqual(obs, set())

del self.metadata['primer']
pt = npt.assert_warns(QiitaDBWarning, PrepTemplate.create,
self.metadata, self.new_raw_data,
self.test_study, self.data_type)

caught_QiitaDBWarning = False

with warnings.catch_warnings(record=True) as w:
warnings.simplefilter("always")
pt = PrepTemplate.create(self.metadata, self.new_raw_data,
self.test_study, self.data_type)

# There might be several warnings raised. Make sure one of them
# is a QiitaDBWarning
if any([_w.category == QiitaDBWarning for _w in w]):
caught_QiitaDBWarning = True

self.assertTrue(caught_QiitaDBWarning)

obs = pt.check_restrictions(
[PREP_TEMPLATE_COLUMNS['EBI'],
Expand Down