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v1.4.1

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@remyeltorro remyeltorro released this 14 Oct 18:40
· 258 commits to main since this release

New features

  • Multi-population: exit effectors and targets, you can now perform single-cell analysis for as many cell populations as needed, naming them as convenient.
  • Cell diameter tuning: you can now tune your cell diameter when using any kind of segmentation model (and not just the generalist ones). If your model works well for a specific modality but your new cells are physically bigger or larger than before you will be able to estimate this size difference and trick the model.
  • Any timeseries for event detection: you can now pass any of the available timeseries when calling an event detection model as 1D (e.g. variation of an intensity measurement, same signal shape).
  • Progress bar during neighborhood computation.
  • More wells and positions: the limit in the possible number of wells and positions was increased to 512.
  • Offset shift in background correction: you can now subtract the dark level of the camera in your image correction protocol. Infinite values are converted to NaNs and can be interpolated.
  • Bug and ergonomy fixes.
  • New "How-to" guides in the documentation to perform specific actions.

Full Changelog: v1.4.0...v1.4.1