fix missing markdown blocks from jupytext conversion

Author: rsokl

Python/Module3_IntroducingNumpy/AdvancedIndexing.md

@@ -128,12 +128,13 @@ The instruction for accessing the contents of `y` in this way is straight-forwar
 
 This returns a *copy* of the data, as do all occurrences of advanced indexing.
 
-
+<!-- #region -->
 ```python
 # advanced indexing returns a copy
 >>> np.shares_memory(y, y[index])
 False
 ```
+<!-- #endregion -->
 
 <!-- #region -->
 The indexing array can have an arbitrary shape; *the resulting array will match that shape*.

Python/Module3_IntroducingNumpy/Broadcasting.md

@@ -70,7 +70,6 @@ In effect, NumPy treated `y` as if its contents had been broadcasted along a new
 
 It is important to note that NumPy doesn't really create this broadcasted version of `y` behind the scenes; it is able to do the necessary computations without having to redundantly copy its contents into a shape-(3,4) array. Doing so would be a waste of memory and computation. That being said, this replication process conveys exactly the mathematics of broadcast operations between arrays; thus the preceding diagram reflects how you should always envision broadcasting.  
 
-<!-- #endregion -->
 
 Broadcasting is not reserved for operations between 1-D and 2-D arrays, and furthermore both arrays in an operation may undergo broadcasting. That being said, not all pairs of arrays are broadcast-compatible.
 
@@ -109,7 +108,7 @@ array([[[ 0,  0],
 >>> np.array([1, 2]) * np.array([0, 1, 2])
 ValueError: operands could not be broadcast together with shapes (2,) (3,) 
 ```
-
+<!-- #endregion -->
 
 <div class="alert alert-info"> 
 

Python/Module3_IntroducingNumpy/VectorizedOperations.md

@@ -322,6 +322,7 @@ You *can* apply binary NumPy functions to arrays of unlike shapes. For instance,
 </div>
 
 
+<!-- #region -->
 ```python
 # example of a binary function operating on two 2D arrays
 >>> x = np.array([[10,  2],
@@ -338,7 +339,7 @@ array([[11,  2],
 >>> x[:, 0] + y[1, :]
 array([6, 2])
 ```
-
+<!-- #endregion -->
 
 <div class="alert alert-info"> 
 
@@ -378,7 +379,7 @@ array([ 1.,  4.,  9.])
 ```
 
 This process generalizes to an array of any dimensionality and shape. 
-<!-- #endregion -->
+
 
 ```python
 # examples of a binary function operating on a scalar & an array
@@ -401,6 +402,7 @@ array([[  0,  -2,  -4,  -6],
        [ -8, -10, -12, -14]])
 ```
 
+<!-- #endregion -->
 
 <div class="alert alert-info">
 

Python/Module4_OOP/Introduction_to_OOP.md

@@ -106,6 +106,7 @@ class Rectangle:
 An instance of this `Rectangle` class is an individual rectangle whose *attributes* include its width, height, and center-location. Additionally, we can use the rectangle's *methods* (its attributes that are functions) to compute its area and the locations of its corners. 
 <!-- #endregion -->
 
+<!-- #region -->
 ```python
 # create a rectangle of width 4, height 10, centered at (0, 0)
 # here __init__ is executed and the width/height/center attributes are set
@@ -124,7 +125,7 @@ Rectangle(width=4, height=10, center=(0, 0))
 >>> rect1.compute_corners()   
 [(2.0, 5.0), (2.0, -5.0), (-2.0, -5.0), (-2.0, 5.0)]
 ```
-
+<!-- #endregion -->
 
 Just like any other Python object that we have encountered, we can put our `Rectangle`s in lists, store them as values in dictionaries, pass them to functions, reference them with multiple variables, and so on.
 

Python/Module5_OddsAndEnds/WorkingWithFiles.md

@@ -64,7 +64,7 @@ WindowsPath('data/data1.txt')
 See that the `/` operator, when used in conjunction with a `Path` instance, created a new path with the appropriate path-separator for the present OS. This is extremely convenient! 
 
 Let's proceed to explore some other useful methods that `Path` provides us with. These methods enable us to inspect directories and files, create new directories, list all of the files in a directory, open files to for reading/writing, and much more. A complete listing of these methods can be found [here](https://docs.python.org/3/library/pathlib.html#methods-and-properties) and [here](https://docs.python.org/3/library/pathlib.html#methods), collectively; it is highly recommended that you take time to look through them.
-<!-- #endregion -->
+
 
 ```python
 >>> root = Path(".")
@@ -99,6 +99,7 @@ WindowsPath('C:/Users/TerranceWasabi/Desktop/PLYMI/Module5_OddsAndEnds/data/data
 'data\\data1.txt'
 ```
 
+<!-- #endregion -->
 
 <div class="alert alert-info">
 

Python/conf.py

@@ -43,7 +43,7 @@
     '.md': lambda s: jupytext.reads(s, '.md'),
 }
 
-nbsphinx_allow_errors = True
+nbsphinx_allow_errors = False
 
 # Add any paths that contain templates here, relative to this directory.
 templates_path = ['_templates']