scipp · jokasimr · Jul 18, 2025 · Jul 16, 2025 · Jul 16, 2025 · Jul 16, 2025
diff --git a/.copier-answers.yml b/.copier-answers.yml
@@ -1,5 +1,5 @@
 # Changes here will be overwritten by Copier; NEVER EDIT MANUALLY
-_commit: 3f79959
+_commit: 3561fcd
 _src_path: gh:scipp/copier_template
 description: Reflectometry data reduction for the European Spallation Source
 max_python: '3.13'

diff --git a/.github/workflows/nightly_at_main_lower_bound.yml b/.github/workflows/nightly_at_main_lower_bound.yml
@@ -0,0 +1,37 @@
+name: Nightly test using lower bound dependencies
+
+on:
+  workflow_dispatch:
+  schedule:
+    - cron: '30 1 * * 1-5'
+
+jobs:
+  setup:
+    name: Setup variables
+    runs-on: 'ubuntu-24.04'
+    outputs:
+      min_python: ${{ steps.vars.outputs.min_python }}
+    steps:
+      - uses: actions/checkout@v4
+      - name: Get Python version for other CI jobs
+        id: vars
+        run: echo "min_python=$(< .github/workflows/python-version-ci)" >> "$GITHUB_OUTPUT"
+
+  tests:
+    name: Tests at lower bound
+    needs: setup
+    strategy:
+      matrix:
+        os: ['ubuntu-24.04']
+        python:
+          - version: '${{needs.setup.outputs.min_python}}'
+    runs-on: ${{ matrix.os }}
+    env:
+        ESS_PROTECTED_FILESTORE_USERNAME: ${{ secrets.ESS_PROTECTED_FILESTORE_USERNAME }}
+        ESS_PROTECTED_FILESTORE_PASSWORD: ${{ secrets.ESS_PROTECTED_FILESTORE_PASSWORD }}
+    steps:
+      - uses: actions/checkout@v4
+      - uses: astral-sh/setup-uv@v6
+        with:
+          python-version: ${{ matrix.python.version }}
+      - run: uv run --extra=test --resolution=lowest-direct pytest
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -36,6 +36,8 @@ repos:
       - id: codespell
         additional_dependencies:
           - tomli
+        exclude_types:
+          - svg
   - repo: https://github.com/pre-commit/pygrep-hooks
     rev: v1.10.0
     hooks:

diff --git a/docs/about/index.md b/docs/about/index.md
@@ -2,11 +2,11 @@
 
 ## Development
 
-ESSreflectometry is an open source project by the [European Spallation Source ERIC](https://europeanspallationsource.se/) (ESS).
+ESSreflectometry is an open source project by the [European Spallation Source ERIC](https://ess.eu/) (ESS).
 
 ## License
 
-ESSreflectometry is available as open source under the [BSD-3 license](https://opensource.org/licenses/BSD-3-Clause).
+ESSreflectometry is available as open source under the [BSD-3 license](https://opensource.org/license/BSD-3-Clause).
 
 ## Citing ESSreflectometry
 

diff --git a/docs/conf.py b/docs/conf.py
@@ -32,7 +32,8 @@
     'sphinx_autodoc_typehints',
     'sphinx_copybutton',
     'sphinx_design',
-    "sphinxcontrib.bibtex",
+    'sphinxcontrib.bibtex',
+    'sphinxcontrib.autodoc_pydantic',
     'nbsphinx',
     'myst_parser',
 ]

diff --git a/pyproject.toml b/pyproject.toml
@@ -31,25 +31,25 @@ requires-python = ">=3.10"
 # Run 'tox -e deps' after making changes here. This will update requirement files.
 # Make sure to list one dependency per line.
 dependencies = [
-  "dask",
+  "dask>=2022.1.0",
   "python-dateutil",
   "graphviz",
-  "plopp",
-  "orsopy",
+  "plopp>=24.7.0",
+  "orsopy>=1.2",
   "sciline>=24.6.0",
   "scipp>=24.09.1",  # Fixed new hist/bin API
-  "scippneutron>=24.7.0",
+  "scippneutron>=24.10.0",
   "scippnexus>=24.9.1",
-  "essreduce",
-  "pandas",
+  "essreduce>=25.4.0",
+  "pandas>=2.1.2",
 ]
 
 dynamic = ["version"]
 
 [project.optional-dependencies]
 test = [
-    "pytest",
-    "pooch",
+    "pytest>=7.0",
+    "pooch>=1.5",
 ]
 all = [
   "ipywidgets",

diff --git a/requirements/base.in b/requirements/base.in
@@ -2,14 +2,14 @@
 # will not be touched by ``make_base.py``
 # --- END OF CUSTOM SECTION ---
 # The following was generated by 'tox -e deps', DO NOT EDIT MANUALLY!
-dask
+dask>=2022.1.0
 python-dateutil
 graphviz
-plopp
-orsopy
+plopp>=24.7.0
+orsopy>=1.2
 sciline>=24.6.0
 scipp>=24.09.1
-scippneutron>=24.7.0
+scippneutron>=24.10.0
 scippnexus>=24.9.1
-essreduce
-pandas
+essreduce>=25.4.0
+pandas>=2.1.2
diff --git a/requirements/base.txt b/requirements/base.txt
@@ -1,4 +1,4 @@
-# SHA1:e1f1193e2c78c1dda6ffc784197fb6babbad9245
+# SHA1:130d28f27af16c0c6e122d19bb76f37750334d26
 #
 # This file was generated by pip-compile-multi.
 # To update, run:
@@ -77,7 +77,7 @@ partd==1.4.2
     # via dask
 pillow==11.3.0
     # via matplotlib
-plopp==25.7.0
+plopp==25.7.1
     # via
     #   -r base.in
     #   scippneutron

diff --git a/requirements/basetest.in b/requirements/basetest.in
@@ -7,5 +7,5 @@
 # will not be touched by ``make_base.py``
 # --- END OF CUSTOM SECTION ---
 # The following was generated by 'tox -e deps', DO NOT EDIT MANUALLY!
-pytest
-pooch
+pytest>=7.0
+pooch>=1.5
diff --git a/requirements/basetest.txt b/requirements/basetest.txt
@@ -1,4 +1,4 @@
-# SHA1:54ed0e3deb2d458e91bae14067e84eaad659f5fd
+# SHA1:ca39ad2dd07c303d616b3b63afee59b3c41e83fe
 #
 # This file was generated by pip-compile-multi.
 # To update, run:

diff --git a/requirements/ci.txt b/requirements/ci.txt
@@ -15,7 +15,7 @@ charset-normalizer==3.4.2
     # via requests
 colorama==0.4.6
     # via tox
-distlib==0.3.9
+distlib==0.4.0
     # via virtualenv
 filelock==3.18.0
     # via

diff --git a/requirements/dev.txt b/requirements/dev.txt
@@ -48,7 +48,7 @@ json5==0.12.0
     # via jupyterlab-server
 jsonpointer==3.0.0
     # via jsonschema
-jsonschema[format-nongpl]==4.24.0
+jsonschema[format-nongpl]==4.24.1
     # via
     #   jupyter-events
     #   jupyterlab-server

diff --git a/requirements/docs.in b/requirements/docs.in
@@ -1,4 +1,5 @@
 -r base.in
+autodoc-pydantic
 ipykernel
 ipython!=8.7.0  # Breaks syntax highlighting in Jupyter code cells.
 myst-parser

diff --git a/requirements/docs.txt b/requirements/docs.txt
@@ -1,4 +1,4 @@
-# SHA1:115367bb8120d51de5386764a1bfb682e35fb591
+# SHA1:f9a72007a97d079a7753508dd281cc73be31c115
 #
 # This file was generated by pip-compile-multi.
 # To update, run:
@@ -16,6 +16,8 @@ attrs==25.3.0
     # via
     #   jsonschema
     #   referencing
+autodoc-pydantic==2.2.0
+    # via -r docs.in
 babel==2.17.0
     # via
     #   pydata-sphinx-theme
@@ -89,7 +91,7 @@ jinja2==3.1.6
     #   nbconvert
     #   nbsphinx
     #   sphinx
-jsonschema==4.24.0
+jsonschema==4.24.1
     # via nbformat
 jsonschema-specifications==2025.4.1
     # via jsonschema
@@ -171,6 +173,8 @@ pybtex==0.25.1
     #   sphinxcontrib-bibtex
 pybtex-docutils==1.0.3
     # via sphinxcontrib-bibtex
+pydantic-settings==2.10.1
+    # via autodoc-pydantic
 pydata-sphinx-theme==0.16.1
     # via -r docs.in
 pygments==2.19.2
@@ -180,6 +184,8 @@ pygments==2.19.2
     #   nbconvert
     #   pydata-sphinx-theme
     #   sphinx
+python-dotenv==1.1.1
+    # via pydantic-settings
 pyzmq==27.0.0
     # via
     #   ipykernel
@@ -203,6 +209,7 @@ soupsieve==2.7
 sphinx==8.1.3
     # via
     #   -r docs.in
+    #   autodoc-pydantic
     #   myst-parser
     #   nbsphinx
     #   pydata-sphinx-theme

diff --git a/requirements/nightly.in b/requirements/nightly.in
@@ -1,14 +1,14 @@
 
 # --- END OF CUSTOM SECTION ---
 # The following was generated by 'tox -e deps', DO NOT EDIT MANUALLY!
-dask
+dask>=2022.1.0
 python-dateutil
 graphviz
-orsopy
-essreduce
-pandas
-pytest
-pooch
+orsopy>=1.2
+essreduce>=25.4.0
+pandas>=2.1.2
+pytest>=7.0
+pooch>=1.5
 plopp @ git+https://github.com/scipp/plopp@main
 sciline @ git+https://github.com/scipp/sciline@main
 scippneutron @ git+https://github.com/scipp/scippneutron@main

diff --git a/requirements/nightly.txt b/requirements/nightly.txt
@@ -1,4 +1,4 @@
-# SHA1:1d5357c0111d56b227d417d6b9ca1c0de673c437
+# SHA1:a521e061e365845bc9f865de42e02ae8ce9489b1
 #
 # This file was generated by pip-compile-multi.
 # To update, run:

diff --git a/requirements/static.txt b/requirements/static.txt
@@ -7,7 +7,7 @@
 #
 cfgv==3.4.0
     # via pre-commit
-distlib==0.3.9
+distlib==0.4.0
     # via virtualenv
 filelock==3.18.0
     # via virtualenv