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SEIR experiments

Shihao Yang added 30 commits December 1, 2024 13:48
…re might be some numerical instability in the ground truth simulation that you use to generate those data
…ched for TF and pytorch comparison on GP derivative mapping applied on the same corrected data.

For pytorch, the finite difference and the GP agrees really well. For TF, they differ quite a bit on the edge time points. The data is the same, so the finite difference in these two pictures is exactly the same, which serve as an anchor.
…the PyTorch. The R component recovery is bad, but there is not much we can do about it. We will need to edit the experimental setup. Now, I am also removing the debugging code.
…d case is working. I am trying to generate the forecasting, but I think this picture alone we can already put into the paper.
…d case is working. I am trying to generate the forecasting, but I think this picture alone we can already put into the paper.
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