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Update spinal cord seg of T2w with contrast-agnostic v3.1 #178

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Merged
merged 3 commits into from
Mar 13, 2025
Merged

Update spinal cord seg of T2w with contrast-agnostic v3.1 #178

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4b2a7e6
update spinal cord seg of T2w with contrastagnostic v3.0
sandrinebedard Mar 11, 2025
034e5a3
fix jsons
sandrinebedard Mar 12, 2025
cb01003
Remove duplicate lines in JSON
mguaypaq Mar 13, 2025
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11 changes: 4 additions & 7 deletions derivatives/labels/sub-amu01/anat/sub-amu01_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-06-08 15:05:54"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-amu01_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-amu01 -o sub-amu01_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-amu01/anat/sub-amu01_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s37947--f18753bdda9d668a65b3c3401b1dea42a3691a48b59f53211e18fac52921caaf.nii.gz
/annex/objects/SHA256E-s37153--b7d6a420a9169c8e4a980472c15a3bd08964be6ba1b854a83a1c87e34253155d.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-07-25 13:41:44"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-amu02_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-amu02 -o sub-amu02_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-amu02/anat/sub-amu02_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s69769--79b1a5e51fc42b153d85769b24136a7699956dc000b37e9e25d82cd6c2750b21.nii.gz
/annex/objects/SHA256E-s37358--c12f647257e3ffe3bc7d6f43419a7bd4944cdfa3385eedd4fa8ff22f4f59c779.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-amu03/anat/sub-amu03_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-07-25 13:44:48"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-amu03_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-amu03 -o sub-amu03_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-amu03/anat/sub-amu03_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s67911--1a8b5161a402b89b5883d8d798f61fc86d2ac95e256f1516df00d4a92f750851.nii.gz
/annex/objects/SHA256E-s36018--a0fb9ec83387411f8b41e04d765207471256d3bf168eb38413af88957486848d.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-amu04/anat/sub-amu04_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-14 09:59:46"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-amu04_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-amu04 -o sub-amu04_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-amu04/anat/sub-amu04_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s68671--8378a697d12e939ebdd72d497bf3cefe10b60719fed66f080c71df0d1cb36e11.nii.gz
/annex/objects/SHA256E-s36461--f35266585213728f78d5c3274c42955bf170e88b373f1283c4fe4d84ace63cb8.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-amu05/anat/sub-amu05_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-06-08 15:05:54"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-amu05_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-amu05 -o sub-amu05_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-amu05/anat/sub-amu05_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s37258--d9067ba0048d03fdefe360d9d3a24c8c1b46d6472db638975880c7fa1b390fb3.nii.gz
/annex/objects/SHA256E-s36617--f69984b3f426799db2e2b7b64d7b2b1a1982de57167968f55da459f535a28a13.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-06-08 15:05:55"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-balgrist01_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-balgrist01 -o sub-balgrist01_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-balgrist01/anat/sub-balgrist01_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s36577--76e00ce1f62b162f5daf6c8f79c7e63ac43e834bdf1ab4dde6b028546b558d96.nii.gz
/annex/objects/SHA256E-s36513--4be40587a3970cf5194d54649636bae1ab377519907075a1a78c3e64275a4978.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-14 14:27:30"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-balgrist02_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-balgrist02 -o sub-balgrist02_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-balgrist02/anat/sub-balgrist02_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s68898--41fa60a65329319117bfbae8075d6c429fa88072d8954fbbe736f4cd3a644360.nii.gz
/annex/objects/SHA256E-s37171--a32d4cf21de6d5abfbee010d72d983abbe3de7293efc2ac80fcad61418e01868.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-15 09:09:15"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-balgrist03_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-balgrist03 -o sub-balgrist03_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-balgrist03/anat/sub-balgrist03_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s68914--0da7f8bb447ecd7f86fe0c9b717d22ed3fc5d8c509305134f56136de642ad126.nii.gz
/annex/objects/SHA256E-s36847--830d252034afa23466b429de8a1fc4809fc5a1c5db01346d01785f19efcfbd6e.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-14 14:15:27"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-balgrist04_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-balgrist04 -o sub-balgrist04_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-balgrist04/anat/sub-balgrist04_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s70304--c3327b12d1245be22b768186cce352e7283d4276f79b8995a6cf5696abf1272f.nii.gz
/annex/objects/SHA256E-s37535--d2792c418c2d133278e2e99d6f9bb92eb0fde6748afa21cc66b59a492fda6800.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-15 09:26:52"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-balgrist05_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-balgrist05 -o sub-balgrist05_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-balgrist05/anat/sub-balgrist05_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s69164--be33ae196ac1d11b6a618956f0f7f74287df35818d30c2098d8d3e70a2c30511.nii.gz
/annex/objects/SHA256E-s36757--b0f15a8e52982bc399956118bf8856d317ccaefddd433234d3e3c00c20eb2e57.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-06-08 15:05:55"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-balgrist06_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-balgrist06 -o sub-balgrist06_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-balgrist06/anat/sub-balgrist06_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s37101--1540e1c586bc7bae607ec112dfbea26b468517152a9cfc0a4f60c763dbe1ce73.nii.gz
/annex/objects/SHA256E-s36929--02629af4b689ac1146aaddf74e1a7ac42ae557f0b8e2b3bfc84771b6847f6a69.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-14 14:22:42"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-barcelona05_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-barcelona05 -o sub-barcelona05_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-barcelona05/anat/sub-barcelona05_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s69672--2d55147526141cb1df75d4a3a6ff4dbddc48f3b39fe95ac23e1411e3f59836bc.nii.gz
/annex/objects/SHA256E-s37918--a72187725873c748b5c8ce537429f2122fe2a8504915f9163cef44a074b2f303.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Sandrine Bedard",
"Date": "2021-06-08 15:05:56"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-barcelona06_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-barcelona06 -o sub-barcelona06_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-barcelona06/anat/sub-barcelona06_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s38766--9fc6aa31da23d8266351b6948419764a2b537946b59543856fb8aeba82379a17.nii.gz
/annex/objects/SHA256E-s38467--25b650943e83c321d9b0ae197e0676dae7801fd0a578fee8b65bb23b974f2a58.nii.gz
11 changes: 4 additions & 7 deletions derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T2w_label-SC_seg.json
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"SpatialReference": "orig",
"GeneratedBy": [
{
"Name": "sct_deepseg_sc",
"Version": "SCT v6.2"
},
{
"Name": "Manual",
"Author": "Etienne Bergeron",
"Date": "2021-06-14 09:47:22"
"Name": "spinalcordtoolbox: sct_deepseg -i sub-beijingGE01_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-beijingGE01 -o sub-beijingGE01_T2w_label-SC_seg.nii.gz",
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"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-beijingGE01/anat/sub-beijingGE01_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s60232--8e082ded5fa32cf4fe5d9428fc2e654f3bdd20e367e3138443b8d2cb67497738.nii.gz
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11 changes: 4 additions & 7 deletions derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T2w_label-SC_seg.json
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"SpatialReference": "orig",
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{
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"Name": "spinalcordtoolbox: sct_deepseg -i sub-beijingGE02_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-beijingGE02 -o sub-beijingGE02_T2w_label-SC_seg.nii.gz",
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"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-beijingGE02/anat/sub-beijingGE02_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s32738--769e497a0903ac7bb55f5b0e41d4647b7f4661510c0bcc509add56b63f394191.nii.gz
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11 changes: 4 additions & 7 deletions derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T2w_label-SC_seg.json
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"SpatialReference": "orig",
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"Name": "spinalcordtoolbox: sct_deepseg -i sub-beijingGE03_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-beijingGE03 -o sub-beijingGE03_T2w_label-SC_seg.nii.gz",
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"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-beijingGE03/anat/sub-beijingGE03_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s60766--703b0e8f46d479c3da01861f2cc91e90ddcebf2adc88e232610750a26aa3b160.nii.gz
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11 changes: 4 additions & 7 deletions derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2w_label-SC_seg.json
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"SpatialReference": "orig",
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"Name": "spinalcordtoolbox: sct_deepseg -i sub-beijingPrisma01_T2w.nii.gz -task seg_sc_contrast_agnostic -largest 1 -qc qc -qc-subject sub-beijingPrisma01 -o sub-beijingPrisma01_T2w_label-SC_seg.nii.gz",
"Version": "git-master-310834f50bfc9e3f9c68d696ada10a2223a882de*",
"CodeURL": "https://github.com/spinalcordtoolbox/spinalcordtoolbox/blob/310834f50bfc9e3f9c68d696ada10a2223a882de/spinalcordtoolbox/scripts/sct_deepseg.py",
"ModelURL": "https://github.com/sct-pipeline/contrast-agnostic-softseg-spinalcord/releases/download/v3.1/model_contrast_agnostic_20250123.zip"
}
]
}
2 changes: 1 addition & 1 deletion derivatives/labels/sub-beijingPrisma01/anat/sub-beijingPrisma01_T2w_label-SC_seg.nii.gz
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/annex/objects/SHA256E-s37394--cc31b7c39a145b3180d1956523bf5e5cad369cb6a8983ce59d3d766d4a316999.nii.gz
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