Helio's Summer Project
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Updated
Jun 27, 2024 - Jupyter Notebook
Helio's Summer Project
Python project using neural networks to design antibiotic compounds that have affinity to an specific target, in function of the IC50 value associated between the FASTA target sequence and the generated SMILE compounds
Shiny-based application for personalized dosing of flucloxacillin
ARGs-OAP: Online Analysis Pipeline for Antibiotic Resistance Genes Detection from Metagenomic Data Using an Integrated Structured ARG Database
R Package for Data-Driven Antimicrobial Stewardship & Surveillance in Hospitals
PyAMPA: The new version of the AMPA software
A simple simulator that shows the easy way how an antibiogram works
An educational simple game in Italian/English that simulates interaction between antbiotics and bacteria.
Talk on Australian COVID-19-related disruptions in health services and data
ABacAPP is a machine learning-based web application capable of predicting the antibacterial potency of any compound against β-lactamases (including β-lactamase, AmpC, Bla2, KPC-2, TEM-1, BRO-1, Class C, Class D, Type II, L1, NDM-1, SHV-1, SHV-5, OXA-1, and Metallo β-lactamase 1 and 2), DNA Gyrases (including DNA Gyrase, GyraseA, and GyraseB), Ba…
Project that estimates the use and overuse of antibiotics in Idaho based on Medicare Part D data.
A repository containing all the file projects that I have for the Bioinformatics 2 (COMP 4312a) course.
Scripts for accessing information about Aquarium High Throughput Culturing operation types through Trident API.
Talk for ACPE2021 on Australian antibiotic use in the first 6 mo of COVID-19
Tuberculosis and the microbiome
Simple calculator made using the Tkinter module in Python. It calculates the centor criteria for tonsilitis that dictates whether a patient should be prescribed antibiotics.
Command line app for predicting bacterial accumulation
West Nile Virus Infection in mice treated with vehicle or various antibiotics: https://www.ncbi.nlm.nih.gov/pubmed/29590614
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