Details of compatibility of software commonly used in tandem
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Updated
Mar 8, 2017 - Python
Details of compatibility of software commonly used in tandem
an investigation into the efficiency of Trinity transcriptome assemblies
A pipeline to to determine the repeat content of genes and their neighboring regions.
My daily notebook on bioinformatic data analysis and machine learning
Task & workflow pipeline framework
A simple job manager for PBS (Portable Batch System)
Antibiotic Resistance in Metagenomes
Generate mappability tracks as BigWig file from genome fasta with GEM
VIOS repository's docker deployment version. Refer to the result on DockerHub.
ASAL - A simple, automated pipeline for metagenomic analysis.
Computational biology pipeline that quantifies RNA splicing and performs sQTL mapping
Pipeline for mapping a bunch of metagenomes to a bunch of reference genomes with bbmap. Then calculating the average percent identity and coverage values for all.
Genomic Biology
🐍🍔 A beginner's guide to modular snakemake workflows.
Pipeline for analysing M. tuberculosis nanopore reads and getting drug susceptibility information.
This is dockerize "somatic paired-WES(Normal-Tumor) pipeline" which is refer to GATK best practice.
Generate the UMI count matrix from CEL-Seq2 sequencing data
Correlation Analysis for Taxonomic Data
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