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blast

Here are 6 public repositories matching this topic...

sparkblastproject / v2

SparkBLAST is a parallelization of a sequence alignment application (BLAST) that employs cloud computing for the provisioning of computational resources and Apache Spark as the coordination framework. Here you will find suplementary material to the article entitled "SparkBLAST: Scalable BLAST processing using in-memory operations", submitted to …

spark parallelization blast

Updated Jun 19, 2017
Java

draeger-lab / TFpredict

Identification and structural characterization of transcription factors based on supervised machine learning

machine-learning bioinformatics transcription-factors prediction identification fasta blast transcription-factor homology sabine

Updated Jul 23, 2019
Java

blinard-BIOINFO / NCBITaxonomy

Tools to build a copy of the NCBI Taxonomy database in a local SQL schema and query it via a Java package.

taxonomy blast taxid blast-searches ncbi species-lists

Updated Sep 2, 2020
Java

sing-group / BDBM

BLAST DataBase Manager

java bioinformatics genome genome-annotation blast sequence transcriptome repository-management emboss java-bioinformatics

Updated Jun 7, 2021
Java

gibarsin / bioinformatics-tp1

Trabajo Práctico para Introducción a Bioinformática en ITBA

dna protein genbank fasta blast bioinfomatics

Updated Jun 12, 2018
Java

gq1 / blast-fasta

blast a fasta file

Updated Mar 8, 2017
Java

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