blast

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Here are 7 public repositories matching this topic...

drostlab / orthologr

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Genome wide orthology inference and dNdS estimation

Updated Oct 10, 2023
R

clemgoub / TE-Aid

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Annotation helper tool for the manual curation of transposable element consensus sequences

annotation structure ltr protein blast transposons transposable-elements tir bioinformatics-tool dot-plot

Updated May 22, 2024
R

drostlab / metablastr

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Seamless Integration of BLAST Sequence Searches in R

protein species blast blast-searches nucleotide biological-sequences blasting blastn blast-search sequence-diversity biomartr blast-hits

Updated Sep 10, 2023
R

Simple shiny app for protease cleavage sites in proteins visualization. Could be helpfull on hplc-ms/ms based experiment design step. In addition to this, some basic tools for protein/peptide properties calculation and sequence data (pre)processing are provided.