blast
Here are 78 public repositories matching this topic...
Calculating the metrics for an input fasta file, formatting an assembly fasta file for blast, blast input gene fasta file to assembly blastdb, parse blast output file into .bp file, parse .bp file to identify hits, extract those hits from assembly fasta file and output them in output file .
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Feb 17, 2017 - Python
The local version of the RecBlast
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Mar 4, 2017 - Python
Most up-to-date scripts used in the Palumbi lab
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Jun 27, 2017 - Python
A Python3 script to quickly spot check 10 random sequences from a BAM/FASTx file.
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Feb 19, 2018 - Python
Retrieve and create a custom BLAST database by taxonomic search
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Feb 23, 2018 - Python
blastadmin is a command wrapper which enables users to run multiple similarity search software in a same interface.
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Aug 26, 2018 - Python
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Oct 9, 2018 - Python
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Mar 28, 2019 - Python
Python script for carrying out reciprocal BLAST hits
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Mar 22, 2020 - Python
Un script de python que usa BLAST, MUSCLE y PROSITE para analizar una serie de proteínas
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Jun 24, 2020 - Python
To map a given pair of motif-domain or domain-domain onto the best PDB complex
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Jul 14, 2020 - Python
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