The snakyVC pipeline is designed for efficiently and parallelly executing variant calling on next-generation sequencing (NGS) whole-genome datasets.
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Updated
Apr 7, 2024 - Python
The snakyVC pipeline is designed for efficiently and parallelly executing variant calling on next-generation sequencing (NGS) whole-genome datasets.
Build Docker container for BWA and (optionally) convert to Apptainer/Singularity.
Genomic Analysis Pipeline: Automate data preprocessing, variant calling, and annotation with Snakemake. Ensure reproducibility and reliability in genomic studies.
A Snakemake pipeline for copy number variant calling without normal tissue samples
Tech Stack: React, and Tailwind CSS
R wrapper for BWA-backtrack and BWA-MEM aligners
The second part of https://github.com/npanuhin/BIOCAD
1,674 S.cerevisiae genomics data
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