Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
-
Updated
Sep 20, 2023 - Python
Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.
Software for prediction of plasmid sequences in metagenomic assemblies
✨🧬 Refined binning of metagenomic contigs using assembly graphs
🚦🧬 Binning Metagenomic Contigs via Composition, Coverage and Assembly Graphs
☯️🧬 Refined and Overlapped Binning of Metagenomic Contigs Using Assembly Graphs
Simulate metagenomic short reads from one or more populations.
Software to identify plasmid sequence data from metagenome using logistic regression and Minhash
Toolkit for binning FASTA, FASTQ and FAST5 files according to taxonomic annotation
Take information about snps on short sequence reads and accurately place the snps in a reference genome
Visualize read-to-contig alignment during assembly analysis
Compare and shuffle heterozygosity using BED and VCF files
Add a description, image, and links to the contigs topic page so that developers can more easily learn about it.
To associate your repository with the contigs topic, visit your repo's landing page and select "manage topics."