Convert output from Cram (and some other tools) to TAP (Test Anything Protocol)
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Updated
Mar 8, 2023 - Python
Convert output from Cram (and some other tools) to TAP (Test Anything Protocol)
Machinekit configuration for the Fabrikator Mini + CRAMPS board
Tool for adding genomic variants to an existing genome (in SAM/BAM/CRAM format). Currently supported variants are SNVs, indels and SVs (insertions, deletions, translocations, inversions and duplications). It generates realistic genomes as almost always less than 99% of the original real genome is modified.
Using ChatGPT & GPT-4 to generate CRAM & PyCRAM designators in a one-shot fashion
Functional tests for command line applications
ILIAD: A suite of automated Snakemake workflows for processing genomic data for downstream applications
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