Comprehensive design of CRISPR gRNAs for nucleases and base editors
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Updated
Jul 18, 2024 - R
Comprehensive design of CRISPR gRNAs for nucleases and base editors
GEMINI: A variational Bayesian approach to identify genetic interactions from combinatorial CRISPR screens
Collection of R packages that work in harmony for CRISPR gRNA design
A workflow to analyse sequence mutations in CRISPR-CAS9 targeted amplicon sequencing data
An interactive exploration/visualization platform to help you lift the fog from your CRISPR analyses.
Useful human and mouse data for the crisprVerse ecosystem
Visualization of CRISPR guide RNAs (gRNAs)
Base functions and classes for CRISPR gRNA design
A Snakemake workflow for the design of small guide RNAs (sgRNAs) for CRISPR applications.
Bowtie-based alignment of CRISPR gRNA spacer sequences
AlleleProfileR - gene editing bioinformatics analysis tool
Shiny interface for CRISPR gRNAs designed with the crisprVerse
BWA-based alignment of CRISPR gRNA spacer sequences
Annotate CRISPR and shRNA screening libraries
an R package for repairing, comparing, and visualizing CRISPRs across environmental datasets
Pre-trained models for the crisprScore package
This repository includes scripts used in "Contribution of CRISPRable DNA on human complex traits"
Multi-omics analysis of LFQ proteomics and transcriptomics of an ALMS1 gene knockout cell model after TGF-B pathway stimulation.
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