Tools to interpret CT scan of halite
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Updated
Jun 7, 2019 - Python
Tools to interpret CT scan of halite
Workflow-centred open-source fully automated lung volumetry in chest CT.
End-to-end Python CT volume preprocessing pipeline to convert raw DICOMs into clean 3D numpy arrays for ML. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality Prediction with Large-Scale Chest Computed Tomography Volumes."
A python class compatible with TensorFlow to perform data augmentation on 3D objects during CNN training.
Idiopathic pulmonary fibrosis (IPF) is a restrictive interstitial lung disease that causes lung function decline by lung tissue scarring. Although lung function decline is assessed by the forced vital capacity (FVC), determining the accurate progression of IPF remains a challenge. To address this challenge, we proposed Fibro-CoSANet, a novel end…
CNN's for bone segmentation of CT-scans.
A simple privacy-focused web panel in flask for labeling CT Scan's slices
An implementation of a HIAS compatible xDNN classifier by Nitin Mane. Inspired by SARS-CoV-2 CT-scan dataset: A large dataset of real patients CT scans for SARS-CoV-2 identification by Eduardo Soares, Plamen Angelov, Sarah Biaso, Michele Higa Froes, Daniel Kanda Abe.
U-Net for biomedical image segmentation
A combination of work done in our MPhys project and in the internship with the Christie NHS Foundation Trust over the summer.
A COVID-19 CT Scan Dataset Applicable in Machine Learning and Deep Learning
Reconstruction of medical image data using DICOM format input data
COVID-19 Classification from 3D CT Images
Machine learning models for multi-organ, multi-disease prediction in chest CT volumes. From paper Draelos et al. "Machine-Learning-Based Multiple Abnormality Prediction with Large-Scale Chest Computed Tomography Volumes."
LUng CAncer Screeningwith Multimodal Biomarkers
Segmentation and Classification models for COVID CT scans (COVID, pneumonia, normal) based on Mask R-CNN.
An official implementation of PCRLv2 (pre-training and fine-tuning code are included).
View volumetric (3D) medical images in Jupyter notebooks
Image-to-image deep learning framework for MRI to porosity map translation
A repository containing deep learning models and evaluation methods for enhancing medical image segmentation in Computed Tomography (CT) scans, with a focus on U-Net variants, nnUNet, and Swin-UNet architectures.
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