A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

💥 Command line tool for automatic liver parenchyma and liver vessel segmentation in CT using a pretrained deep learning model

[Nature Machine Intelligence Journal] Official pytorch implementation for Uncertainty-Guided Dual-Views for Semi-Supervised Volumetric Medical Image Segmentation

A certificate transparency log keyword sniffer written in python

Python package for tomographic data processing and reconstruction

ResUnet for MR-only BNCT planning

Repository for the Universal Lesion Segmentation Challenge '23

Pytorch implementation of scikit-image's radon function and more

A deep learning-based fully-automatic intravenous contrast detection tool for head-and-neck and chest CT scans.

A Cascade Transformer-based Model for 3D Dose Distribution Prediction in Head and Neck Cancer Radiotherapy

detection of covid-19 from X-ray images Using keras and tensorflow

All-In-One Medical Image Restoration via Task-Adaptive Routing (AMIR) (MICCAI 2024).

Code for COVID19 CT labeling. Submillimetric CT dataset provided as well.

Code for the paper "Analysis and comparison of cycle-consistent adversarial networks for CBCT to CT translation for adaptive radiotherapy in cervical and lung cancer patients"

Computed tomography (CT) is one of the most widely used radiography exams worldwide for different diagnostic applications. However, CT scans involve ioniz- ing radiational exposure, which raises health concerns. Counter-intuitively, low- ering the adequate CT dose level introduces noise and reduces the image quality, which may impact clinical di…

Reimplementation of the PLS-Net architecture used for lung lobe segmentation in CT

Open source codes

3D image registration training framework using adaptive loss weighting and synthetic data generation

Emulate SUPPORT_COLOR_TEMP for color lights that doesn't support color temp (like some Ikea Tradfri bulbs) - Home Assistant component

A rule-based algorithm enabled the automatic extraction of disease labels from tens of thousands of radiology reports. These weak labels were used to create deep learning models to classify multiple diseases for three different organ systems in body CT.