The CWL workflow to execute the OxoG filter.
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Updated
Feb 5, 2018 - Python
The CWL workflow to execute the OxoG filter.
This workflow performs annotation on SNV and INDEL VCFs.
Gerber: Generalized Easy Reproducible Bioinformatics Environment wRapper
Command line tool to run batch jobs concurrently with ETL framework on AWS or other cloud computing resources
A CWL implementation of a modular GATK Variant Calling pipeline
Wrapper tool of RaGOO by CWL and Docker
Growth Rate Index Calculater wrapped by CWL
This repository contains CWL descriptions of the various tools which will allow you to build workflows for the annotation of transcripts
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CWL workflow that facilitate performing a series of structural and phenotype related third party prediction methods starting from either a protein FASTA file or a list of Uniprot IDs. Integrated prediction methods refer to secondary structure, solvent accessibility, disordered regions, PTS modifications (phosphorylation, glycosylation, lipid mod…
Python project example for Sentinel-1 calibration using CWL for the build/test development phase
Template for running Toil on LSF HPC with ELK stack logging
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Prototype implementation of LivePaper with GIS indices as the subject.
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Generation Quality Controls Files for MSK-ACCESS
CWL examples with the OrfeoToolbox
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