Tools for Imaging Flow Cytometry
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Updated
May 24, 2024 - R
Tools for Imaging Flow Cytometry
An R package for analyzing high-dimensional cytometry data using the tidyverse.
PICAFlow: a complete R workflow dedicated to flow/mass cytometry data, from data pre-processing to deep and comprehensive analysis.
Easily install and load packages from the tidyomcis ecosystem
Flow/Mass Cytometry Gating via Spatial Kernel Density Estimation
Temporal clustering and tracking algorithm which fuses on FlowSOM and ChronoClust, specifically designed for analysing temporal cytometry data
HDStIM: High Dimensional Stimulation Immune Mapping
An R Interactive Shiny Application for the Analysis of Imaging and Conventional Flow Cytometry
Integration of multi-batch cytometry datasets
Fast embedding ot multidimensional datasets, great for cytometry data
Code and results from TotalSeqC antibody titration and pipeline benchmarking for CITE-seq experiments
Data for Imaging Flow Cytometry
R scripts to help with your flow cytometry analysis. Batch index export and overlays
Add a description, image, and links to the cytometry topic page so that developers can more easily learn about it.
To associate your repository with the cytometry topic, visit your repo's landing page and select "manage topics."