Skip to content
#

decoding

Here are 182 public repositories matching this topic...

A Python script that implements an HMM with two states a and b. When the model is in state a it is more likely to emit purines A and G. When it is in state b it is more likely to emit pyramidines C and T. Decode the most likely sequence of states for the GGCT sequence using logarithmic scoring instead of normal probability scoring.

  • Updated Nov 27, 2019
  • Python

The encoding and decoding algorithms perform arithmetic operations on the code string. One recursion of the algorithm handles one data symbol. Arithmetic coding is actually a family of codes which share the property of treating the code string as a magnitude. I am trying to implement the algorithm using python.

  • Updated Feb 23, 2021
  • Python

Improve this page

Add a description, image, and links to the decoding topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the decoding topic, visit your repo's landing page and select "manage topics."

Learn more