Scripts and parameters for generating/analyzing fastSimcoal2 simulations, as part of the IMLS_GCCO project comparing ex situ conservation measures between SNP and microsatellite marker types
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Updated
Jul 19, 2024 - R
Scripts and parameters for generating/analyzing fastSimcoal2 simulations, as part of the IMLS_GCCO project comparing ex situ conservation measures between SNP and microsatellite marker types
R package to accompany Time Series Analysis and Its Applications: With R Examples -and- Time Series: A Data Analysis Approach Using R
The catGenes package is intended to help researchers in phylogenetics and phylogenomics to build a fully concatenated or combined (non-interleaved) dataset by automatically comparing individual DNA alignments.
This R script provides functionality for manipulating DNA and RNA sequences, including generating reverse sequences, complementary sequences, and reverse-complementary sequences.
Identification of epigenetic sites in MealyBugs using ONT Nanopore Sequencing
Set of programs to perform taxonomic binning.
Comparing the effects of MDMA and Venlafaxine on Dark Agouti Rats
Bioinformatics- High-throughput data Analysis project
An R package for pre-processing and error evaluation of COI-5P barcode data
R-package to analyse data from the immuno-detection by sequencing (ID-seq) technology.
Data analysis reports done in R for MATH 189: Exploratory Data Analysis and Inference. Topics vary in theme with different statistical metrics & visualizations based on need of structured data
🏺🏛️ Divide and conquer phylogenetic supermatrices and supertrees in R
Decodes digital (byte) information encoded in short DNA sequences (fasta) according to Goldman et al. (2013) and saves it as files
Orthogonal Oligo Design for Fluorescence In Situ Hybridization (a.k.a. OOD-FISH)
Interactive web app to compute and display statistics for genomes or DNA sequences of different organisms
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