Code for the DiscoTope-3.0 paper and model
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Updated
Jun 6, 2024 - Python
Code for the DiscoTope-3.0 paper and model
Sequence-based prediction of peptide-TCR interactions using paired chain data
A tool for downloading HLA alleles, epitopes and frequencies
BMEB Thesis project which develops ssDNA aptamer sequences from probabilistic data per provided protein epitope.
Implementation of the Analytic Hierarchy Process (AHP) to obtain the immunogenicity score of wheat lines based on their celiac disease (CD) epitopes matches on alpha- and gamma-gliadins amplicons by NGS and the score for oligopeptides based on an IFN-g ELISpot assays with fresh peripherical blood mononuclear cells (PBMCs).
Processing of proteomic files for prolamin peptides analysis and CD epitopes search for each protein fraction.
This is a project to contribute utilities for ViruSurf, a viral db centered in viral sequences.
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