Create, modify and analyse phylogenetic trees in R
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Updated
Jun 20, 2024 - R
Create, modify and analyse phylogenetic trees in R
Software for analysing Many-Analysts' style data and generating the ManyEcoEvo project data
PyPop: Python for Population Genomics
a UNIX shell toolkit for processing and analyzing multiple sequence alignments and phylogenies
Carson, B. 2022. SLiM 3 outputs of in silico local adaptation with conditonally deleterious mutations and antagonistic pleiotropy in a two-deme model — Data publication on the FRDR: DOI: 10.20383/102.0526.
Numerical model for life history evolution of age-structured populations
a versatile toolkit for processing and analyzing diverse types of sequence data
a multiple sequence alignment-trimming algorithm for accurate phylogenomic inference
a tree splitting and pruning algorithm for retrieving single-copy orthologs from gene family trees
a broadly applicable tool for automated gene identification and retrieval
Source code for ManyEcoEvo Manuscript
A collection of work investigating the potentiation of associative learning in digital organisms
HARE: Genetic Feature Enrichment Analysis Pipeline
Examine paleoTS model selection performance with time series length
A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.
Personal website - computational molecular evolution & biopipelines
My GitHub Page
A numerical study on the phenomenon of sympatric speciation in both sexual and asexual species, within a static habitat with intra-species competition.
a data structure approach to generate a random sequence from the polyATGC stretches for evolutionary fitness
Evolutionary genomics of chromosomal inversions in Atlantic herring
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