zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
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Updated
May 15, 2023 - R
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
The R package "sarlacc" contains a pipeline to analyse nanopore sequencing data. It trims adapter sequences, retrieves optional UMI's, clusters reads and produces a consensus sequence for each cluster after multiple sequence alignment.
Advanced Rmarkdown templates for generating NGS reports
Access and Format Single-cell RNA-seq Datasets from Public Resources
Pipeline for low-level RNA-Seq data processing
Sequencing data preprocessing
Genome Analysis Toolkit
Quickly download fastq files associated with a GEO series
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