ImageJ macros and scripts written at the imaging facility MRI
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Updated
May 21, 2024 - ImageJ Macro
ImageJ is an open source Java image processing program inspired by NIH Image.
It runs on any computer with a Java 1.8 or later virtual machine.
Downloadable distributions are available for Windows, Mac OS X and Linux.
ImageJ has a strong, established user base, with thousands of plugins and macros for performing a wide variety of tasks.
Fiji is a "batteries-included" distribution of ImageJ, bundling many plugins which facilitate scientific image analysis.
ImageJ macros and scripts written at the imaging facility MRI
ImageJ functions and macros for working with thermal image files
Macros for ImageJ/FIJI
ImageJ / Fiji macro to automatically correct white balance in RGB images
Macros for FIJI in the FIJI Macro Language
"ça y est j'ai une idée! non deux, trois, oh lala, oh lala j'ai plein d'idées..."
This is a full macro for images analysis, cell count and co-staining cell count. Different options are available to analyse your image. You can count co-staining cell in unlimited number of images. the counting is done by size. There is an option to batch image analysis to save some time. You can personnalize the code and the analysis to maximiz…
Fiji/ImageJ macros to quickly add a scale bar to an (electron microscopy) image.
Collection of macros for image processing in Fiji/ImageJ
An ImageJ macro for 2D colocalization of IHC signals in ImageJ and counting RNAscope puncta within cells.
ImageJ macros and plugins.
SMA is an ImageJ macro to automate the analysis of muscle architecture from B-mode ultrasound images.
A repository containing ImageJ macros for the Snyder Lab
FIJI/Image J macros created by NOBIC staff for microscopy facilities users
FIJI macros for Enrichment Analysis