The complete FlowSOM package known from R, now available in Python!
-
Updated
Sep 25, 2024 - Python
The complete FlowSOM package known from R, now available in Python!
Official implementation of Towards Self-Explainable Transformers for Cell Classification in Flow Cytometry Data
Code for Karakaslar, Katiyar et al., Aging Cell 2023
Pipeline for flow cytometry anlaysis
Anonymization app for project Phenotyping Lymphoma with an Artificial Intelligence Toolbox (PLAIT) based on R shiny; access website and AI via eduroam
estimates genomes size using the flow cytometry
Code for GUI visualization of data, for import of GuavaMuse .FCS files, for flow cytometry style gating, and for calculating enrichment and depletion after a given procedure.
An integrative workflow to extract single images from flow citometry files and create multichannel ome.tiff images
A collection of code used to analyze flow cytometry and root density data
Reporting page of the HVP Innovation Award 2019
This neural-network can predict the effector/memory T cell (T lymphocyte) subset of single cells based on flow cytometry data with 99,22% accuracy.
Extract Fluorescence Distribution Data From FCS Files And Recalculate To Events Per Volume
R package to identify and remove redundant information in bivariate flow cytometry data, in order to improve the quality of the training sets for machine learning algorithms.
Code used to analyze and produce figures during tenure in the Translational Tumor Engineering Lab
Example code supporting immunology research
These are iPython notebooks used for analysis in my 2019 ABC-selectivity paper.
HDStIM: High Dimensional Stimulation Immune Mapping
A collection of tools provided by HIMSR
Add a description, image, and links to the flowcytometry topic page so that developers can more easily learn about it.
To associate your repository with the flowcytometry topic, visit your repo's landing page and select "manage topics."