genome
Here are 40 public repositories matching this topic...
An R package to compute the autimorphisms between pairwise aligned DNA sequences represented as elements from a Genomic Abelian group as described in the paper [Genomic Abelian Finite Groups](https://www.biorxiv.org/content/10.1101/2021.06.01.446543v2)
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May 5, 2024 - R
Regional Association of Methylation variability with the Exposome and geNome (RAMEN) is an R package whose goal is to identify Variable Methylated Regions (VMRs) in microarray DNA methylation data. Additionally, using Genotype (G) and Environmental (E) data, it can identify which G, E, G+E or GxE model better explains this variability.
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Mar 18, 2024 - R
El genoma pequeño - analysis workflow for "the little genome"
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Feb 13, 2024 - R
Matrix dissimilarity from the differences of Moments and sparsity
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Feb 9, 2024 - R
Protein folding on VKGL data using FoldX and AlphaFold2
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Jan 25, 2024 - R
karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome
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Jan 11, 2024 - R
dcHiC: Differential compartment analysis for Hi-C datasets
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Jan 10, 2024 - R
cgmisc is an R package for data analyses and visualisation of GWAS results
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Dec 18, 2023 - R
Genomic Data Retrieval with R
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Dec 2, 2023 - R
Extract Sequence from Genome According to Annotation File
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Nov 1, 2023 - R
examination of genome size across all kingdoms
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Sep 4, 2023 - R
An R/Bioconfuctor package for association analysis of genomic regions based on permutation tests
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Aug 31, 2023 - R
Analysis and monitoring of the genomic and proteomic behavior of SARS-CoV-2 in Brazil through bioinformatics and Data Science
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May 28, 2023 - R
acorn is an R package that examines various features of de novo variants including subsetting DNVs by individual, variant type, or genomic region; calculating features including variant change counts, lengths, and presence/absence at CpG sites; and characteristics of parental age and number of DNVs.
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May 18, 2023 - R
an R/Shiny application for interactive creation of non-circular plots of whole genomes
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Dec 28, 2022 - R
visual analysis of your VCF files
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Dec 3, 2022 - R
DeepGenomeScan: A Deep Learning Approach for Whole Genome Scan (WGS) and Genome-wide Association Studies (GWAS)
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Sep 15, 2022 - R
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