gsea
Here are 33 public repositories matching this topic...
R Markdown script to perform bioinformatic analysis on RNA-seq raw count matrices, including DE-testing via DESeq2 and gene set enrichment analysis (GSEA).
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May 22, 2024 - R
Brings bulk and pseudobulk transcriptomics to the tidyverse
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May 16, 2024 - R
📊 A universal enrichment tool for interpreting omics data
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May 15, 2024 - R
Function Enrichment analysis and Network construction
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Apr 29, 2024 - R
Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)
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Feb 26, 2024 - R
condense GSEA terms
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Jan 22, 2024 - R
GSEA plots in ggplot2
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Jan 21, 2024 - R
Interpretation of RNAseq experiments through robust, efficient comparison to public databases
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Dec 6, 2023 - R
Retinal ganglion cells regeneration in 2 days post optic nerve crush retina | Lydia Tai | Dong Feng Chen Lab collaboration | Schepens Eye Research Institute, Mass General Hospital, Harvard Medical School
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Dec 5, 2023 - R
Investigate the role of mtDNA in the sex determination/development of Potamilus streckersoni, a freshwater mussel with doubly uniparental mitochondrial inheritance. Scripts for DESeq2, WGCNA, GSEA, AlphaFold/AlphaPulldown, and mt-sncRNA validation.
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Oct 1, 2023 - R
Gene set enrichment network visualization
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Jun 24, 2023 - R
Computational protemics analysis of cancer cell-lines at the level of single-cells
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May 31, 2023 - R
Enrichment Networks for Pathway Enrichment Analysis
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Apr 14, 2023 - R
MSigDB gene sets for multiple organisms in a tidy data format
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Mar 14, 2023 - R
Differential gene expression and gene enrichment analyses of B-cell lines with stable and transient ectopic expression of HIV-1 Tat protein
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Nov 28, 2022 - R
Differential gene expression and gene enrichment analyses of B-cell line with ectopic expression of HIV-1 Tat protein
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Oct 18, 2022 - R
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