📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.
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Updated
Apr 23, 2024 - Python
📂 HLA allele frequencies in tab-delimited format, downloaded from AFND.
The repository contains all the code for the paper amino acid encoding using deep learning application
Toolkit to aid generation of advanced Polygenic Risk Scores (PRS) including SNP-allele tagging and interaction models, especially in HLA. Developed and maintained by Seth Sharp (S.sharp@exeter.ac.uk).
A script to run HLA typing tools from next generation sequencing data
Python package for doing fast and accurate sequence annotation
A pythonic library for analysing immunopeptidomic experiments
A tool for downloading HLA alleles, epitopes and frequencies
The IMGT/HLA sequence data persisted in a BioSQL database
GAT (Generic Genome-Wide Association Tool)
the peptide immune annotator pipeline (PIA-P) a collection of bash and Python scripts used running peptide HLA interaction from a variety of inputs
A method for predicting promiscuous non-classical HLA binding sites in an antigen
Haplotype analysis tools for genomics studies
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