intrinsically-disordered

Here are 3 public repositories matching this topic...

pol-sb / simul-protein-small-molecule

Tools to study LLPS in IDP systems using the OpenMM python API

simulation biology molecular-dynamics openmm protein-protein-interaction intrinsically-disordered liquid-liquid-phase-separation protein-simulations

Updated Nov 8, 2023
Python

jmborr / idpflex

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Analysis of intrinsically disordered proteins by comparing MD simulations to Small Angle Scattering experiments

proteins simulations scattering neutron md saxs sans lmfit intrinsically-disordered

Updated Dec 26, 2022
Python

hshadman / 2d_conformational_landscape_map

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Use PyConforMap to generate a simple scatter plot to map conformational landscapes of intrinsically disordered proteins, and quantify conformational diversity.

data-science protein-structure jupyter-notebook data-visualization python3 data-structures polymer-chain protein data-visualisation molecular-dynamics-simulation scipy scatter-plot matplotlib monte-carlo-simulation conformational-analysis object-oriented-programming scatterplot-visualization intrinsically-disordered polymer-physics pearson-correlation-coefficient

Updated Apr 30, 2024
Jupyter Notebook

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