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kallisto

Here are 3 public repositories matching this topic...

nf-core / scrnaseq

A single-cell RNAseq pipeline for 10X genomics data

workflow rna-seq pipeline nextflow single-cell kallisto 10x-genomics 10xgenomics nf-core bustools alevin cellranger star-solo

Updated Nov 15, 2024
Nextflow

isugifNF / RNAseq

RNAseq from fastq reads to gene counts/quantification

nextflow multiqc salmon kallisto gsnap fastqc

Updated Aug 13, 2021
Nextflow

cbcrg / kallisto-nf

A nextflow implementation of Kallisto & Sleuth RNA-Seq Tools

pipeline nextflow kallisto sleuth-rna-seq

Updated Jun 3, 2018
Nextflow

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