Acquire & filter mass spectral libraries based on sample taxonomy
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Updated
Jun 8, 2017 - Python
Acquire & filter mass spectral libraries based on sample taxonomy
Work from the Dorrestein Laboratory for processing complex mass spectrometry data.
Workflow for LC-MS feature analysis and spatial mapping
Engine for metabolite annotation for imaging mass spectrometry
A Bio2BEL package for converting the Human Metabolite Database (HMDB) to BEL
Deconvolution of hi-res GC/MS spectra
Isotopic (iso) enumerator (enum) - enumerates isotopically resolved InChI (International Chemical Identifier) for metabolites.
Simultaneous measurement of absolute metabolite concentration and isotope incorporation by mass spectrometry
(Multiblock) Partial Least Squares Regression for Python
Extract signals from J-resolved NMR spectra (Cox et al., 2020)
Integration of isotopic measurements
Scripts for the HEB25_population
Application for the handling and simplification of putative annotations in untargeted metabolomics analysis based on LC/ESI-MS
Analysis Scripts for the associated paper: "Analyzing Assay Specificity in Metabolomics using Unique Ion Signature Simulations " focused on evaluating unique ion signatures.
Python script for extracting dataset from CCLE (Cancer Cell Line Encyclopedia)
Nonlinear Granger causality inference with neural networks for high-resolution mass spectrometry
Python package for the high-throughput nontargeted metabolite fingerprinting of nominal mass direct injection mass spectrometry directly from mzML files.
Thermodynamic analysis of metabolism
A Python package for metabolite enrichment analysis.
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