HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
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Updated
Jul 14, 2020 - Python
HumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
This is the codebase for Recycler, described in our manuscript: https://academic.oup.com/bioinformatics/article/33/4/475/2623362, by Roye Rozov, Aya Brown Kav, David Bogumil, Naama Shterzer, Eran Halperin, Itzhak Mizrahi, and Ron Shamir
Software for prediction of plasmid sequences in metagenomic assemblies
An algorithm for recovering haplotypes from metagenomes
FOCUS: An Agile Profiler for Metagenomic Data
This project aims do describe and explore the metagenomes of fern species of the genus Azolla.
XGBoost implementation for bacteria family identification
Raw sequence metagenomic reads pre-processing: trimming, QC, and host contamination
Minimum Information about any (X) Sequence” (MIxS) specification
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