This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
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Updated
Aug 8, 2023 - HTML
This repository contains all CWL descriptions of the MGnify pipeline version 5.0.
iMAP v1.0 (Pre-release): Integrated Microbiome Analysis Pipeline
MerCat2: python code for versatile k-mer counting and diversity estimation for database independent property analysis for metaome data
Analyzing shotgun data
MetaTrinity is a novel metagenomic analysis tool employing efficient containment search techniques and heuristics for read mapping to achieve significant speedup while maintaining high accuracy. This positions MetaTrinity as an efficient solution, optimally balancing speed and precision in metagenomic analysis.
Projeto de análise metagenômica e metabolômica da microbiota de mulheres no climatério - LBBM UFOP
Fast-polyvalent trimmer used for several applications of next-generation sequencing
This repository contains code for generating an interactive sunburst graphic for metagenomic analysis.
Repository for report for study project «Human Microbiome Research» by Blastim
MetaFast is a novel metagenomic analysis tool employing efficient containment search techniques and heuristics for read mapping to achieve significant speedup while maintaining high accuracy. This positions MetaFast as an efficient solution, optimally balancing speed and precision in metagenomic analysis.
Material used for a course on handling high-throughput genomic data handling, covering DNA sequence assembly, RNA-seq data analysis, metagenomics, and read alignment
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