#

mpileup

Here are 3 public repositories matching this topic...

TC-Hewitt / MuTrigo

Pipeline for gene candidate discovery based on mutagenesis. Featured in gene cloning research published in Nature (DOIs: 10.1038/s41467-020-14937-2, 10.1038/s41467-021-23738-0, 10.1038/s41477-021-00971-5), Molecular Plant (DOI: 10.1016/j.molp.2021.05.010) and New Phytologist (DOI: 10.1111/nph.17075).

python snps ngs python3 snp fasta mutant snv samtools ngs-analysis ngs-pipeline mpileup pileup

Updated Sep 24, 2023
Python

neil-n-zhang / fastpileup

Run BAM file pileup using multithreads

Updated Dec 12, 2023
Python

adeschen / mpileupTools

This python script parses a mpileup file to extract the coverage of each base at each position.

parser coverage bioinformatics position python27 bioinformatics-scripts mpileup

Updated Sep 20, 2024
Python

Improve this page

Add a description, image, and links to the mpileup topic page so that developers can more easily learn about it.

Curate this topic

Add this topic to your repo

To associate your repository with the mpileup topic, visit your repo's landing page and select "manage topics."