Graph theory analysis of brain MRI data

R interface to the ANTs biomedical image processing library

Qoala-T is a supervised-learning tool for quality control of FreeSurfer segmented MRI data

R library for structural neuroimaging. Provides high-level functions to access (read and write) and visualize surface-based brain morphometry data for individuals and groups.

Label the brain MNI coordinate by AAL/BA system

Brainconn - an R package for visualising brain connectivity data in 2D and interactive 3D

GNU R package for reading and writing neuroimaging file formats. Not limited to FreeSurfer anymore, despite its name.

Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data

The QDECR package for vertex-wise analyses in R

Software Tool for the Analysis and Visualization of MRI images of the brain

Fast and easy visualization of fMRI data quality using carpet plots.

R implementation of registration fusion method for MNI152 - 305 mapping.

tacmagic: PET Analysis in R

Scripts to process preclinical obsessive compulsive disorder data

Gradle framework for deriving a tongue model from MRI data.

Code to reproduce results from Labache, L., et al. 2023. Language network lateralization is reflected throughout the macroscale functional organization of cortex. DOI: 10.1038/s41467-023-39131-y

Given a brain coordinate or cluster in MNI305 space, compute MNI152 and Talairach coordinates and find the closest brain regions.

Kaggle competition: Diagnose schizophrenia using multimodal features from MRI scans.

An alternative R package for advanced normalization tools (ANTs)

Classification Challenge of Alzheimer's Disease Using MRIs and Gene Expression Data in R