A Mapping tool using gapped minimizer and BWT FM-index

preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.

Detect and phase minor SNVs from long-read sequencing data

NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations

A versatile compressor of third generation sequencing reads.

🌈Scaffold genome sequence assemblies using linked or long read sequencing data