WikiPathways Database
-
Updated
Sep 22, 2024 - Shell
WikiPathways Database
Analysis and visualization of RNA-Seq results
Single sample Gene Set Enrichment analysis (ssGSEA) and PTM Enrichment Analysis (PTM-SEA)
Gene set variation analysis
Explore the cancer relevance of your gene list
Single sample pathway analysis tools for omics data
Cellular signatures characterisation after carcinogenic chemical exposure in mammalian tissue.
Python Client Package for WikiPathways
Pathway enrichment analysis / visualize for Single Cell Data
Sample code for cross-species analysis of MYC-driven transgenic zebrafish cancer model
pathfindR: Enrichment Analysis Utilizing Active Subnetworks
From RNA-seq raw reads to enriched pathways by DEGs
Single Cell RNA-seq analysis of Persister Cells to unearth key stress pathways and core, differential genes of those respective pathways
CAusal Reasoning for Network Identification with integer VALue programming in R
Explore biomolecular pathways in Reactome from the command-line or a Python script
Web application that enables users to compare the expression of genes or enrichment of gene sets between different molecular subtypes of colorectal cancer
R package for de novo pathway enrichment using KeyPathwayMiner
This repo contains code to pre-process, quant, and analyze RNA-Seq data obtained from human enteriod cell cultures
A compilation of functions and scripts I've created to streamline analysis of phosphoproteomic data in Python!
A Python package for metabolite enrichment analysis.
Add a description, image, and links to the pathway-enrichment-analysis topic page so that developers can more easily learn about it.
To associate your repository with the pathway-enrichment-analysis topic, visit your repo's landing page and select "manage topics."