PACKMAN: PACKing and Motion ANalysis
A complicated method to download all PDB sequences for free has been explained here. Also, a youtube video has been made for easier understanding. Check out the link in ReadME. The downloaded sequences are further cleaned for modeling purposes.
Super lightweight and fast mmCIF/PDB/MOL2 file parser into Pandas DataFrames and backwards writer.
A Python-based parser and analysis tool for Protein Data Bank (PDB) files. The project aims to facilitate the manipulation of PDB files, enabling users to extract and compute various structural properties of proteins, such as counting amino acid residues and calculating distances between atoms.
Python program that can identify the residues interacting between chains of a complex protein.
Użyteczności związane z parsowaniem plików .pdb oraz zdalnym dostępem do baz danych Pfam i UniProt.
The scope of this module is downloading or reading PDB-Files and subsequently parsing them
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