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Oct 17, 2017 - Python
protein-structure
Here are 242 public repositories matching this topic...
Superimpose a set of protein structures and report a RSMD matrix, in CSV and Mega-compatible formats, using Pymol as a module
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Jul 6, 2020 - Python
Performs large-scale ligand identification, curation and extraction from human structures in the Protein Data Bank.
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Mar 26, 2024 - Python
This script aims at reading a given PDB file and generation dihedral angles from it.
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Sep 27, 2017 - Python
Alignement structurale d'une séquence protéique sur une structure protéique 3D.
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Feb 27, 2019 - Python
Course schedule from experience as a selected Undergraduate Teaching Assistant at the University of Pittsburgh course, BIOSC 1540 - Computational Structural Biology, taught by Dr. Jacob Durrant.
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Mar 18, 2019 - Python
PPM.Mk.I.Beta
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Apr 3, 2024 - Python
This is a plugin for PyMol 2.x under Windows to find and show Ca-ion sites in a protein structure in pdb format using the Feature program.
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Apr 12, 2022 - Python
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Mar 22, 2022 - Python
Python implementation of 3D Zernike moments with NumPy
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Apr 29, 2024 - Python
In this research project a standardised AlphaFold 2-based molecular replacement strategy is developed and implemented in an existing biomolecule structure solution pipeline at MAX IV Laboratory. It can be run on high performance clusters similar to the LUNARC (https://www.lunarc.lu.se/). A standalone and implemented version of the pipeline exists.
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May 6, 2024 - Python
HeliStatistiX tool for transmembrane helix analysis.
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Oct 22, 2018 - Python
Code for a class (MIT 20.420) protein design project.
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Oct 22, 2017 - Python
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Mar 23, 2022 - Python
Python implementation of 3D Zernike moments with Tensorflow
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Apr 29, 2024 - Python
Extraction of correlations from multistate PDB protein coordinates
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May 10, 2024 - Python
Graph Convolutional Neural Network for Atom Classification
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Mar 2, 2023 - Python
Implementation of the HP protein folding model with commands line interface
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Nov 24, 2023 - Python
Extension for creating visualizations of distance restraints in PyRy3D Chimera Extension
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Oct 22, 2018 - Python
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