Here are
24 public repositories
matching this topic...
Command-line program and scheduled GitHub action for publishing the BiGG model repository to BioSimulations
Updated
Feb 1, 2024
Python
Repository of rule-based models implemented with the BioNetGen model language (BNGL) and command-line program for publishing RuleHub to BioSimulations
Updated
Apr 4, 2023
Python
XPP mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 28, 2022
Python
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 23, 2022
Python
Summary of the technical documentation for BioSimulators
Updated
Dec 14, 2021
Python
RBApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
BoolNet biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
Python library to download and cache models from BioModels
Updated
Feb 3, 2024
Python
PySCeS biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Oct 18, 2024
Python
CBMPy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
OpenCOR simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Jan 3, 2022
Python
pyNeuroML simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 22, 2022
Python
Registry of containerized biosimulation tools that support a standard command-line interface
Updated
Oct 28, 2024
Python
COBRApy biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 23, 2022
Python
MASSpy mathematical simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Oct 31, 2024
Python
GINsim biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Dec 14, 2021
Python
GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 25, 2022
Python
AMICI biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Apr 22, 2024
Python
BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container
Updated
Feb 25, 2022
Python
Tool for validating that biosimulation software tools implement the BioSimulators standards for simulators
Updated
Sep 30, 2024
Python
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