Distilled and Refined Annotation of Metabolism: A tool for the annotation and curation of function for microbial and viral genomes

A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.

VStrains is a de novo approach for reconstructing strains from viral quasispecies.

Set of tools for viral metagenomics.

A streamlined Oxford Nanopore Viral Metagenomics Pipeline

Viral Metagenomics Assembly and Annotation Pipeline

Uses k-means prediction to ascertain genomic sequences within ambiguously attributed fasta format data. The resulting cluster sequences are used to develop NCBI BLAST requests.

This is a pipeline for exploring viruses (ssDNA, dsDNA phage, and giant DNA viruses) and viral diversity in metagenomes.

Viral genome assemble and characterisation